==================== Structure Similarity ==================== .. autoclass:: pdb2sql.StructureSimilarity.StructureSimilarity .. currentmodule:: pdb2sql.StructureSimilarity.StructureSimilarity i-RMSD (interface RMSD) ~~~~~~~~~~~~~~~~~~~~~~~ .. autosummary:: :toctree: api/ compute_irmsd_fast compute_irmsd_pdb2sql compute_izone l-RMSD (ligand RMSD) ~~~~~~~~~~~~~~~~~~~~~~ .. autosummary:: :toctree: api/ compute_lrmsd_fast compute_lrmsd_pdb2sql compute_lzone FNAT (Fraction of native contacts) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autosummary:: :toctree: api/ compute_fnat_fast compute_fnat_pdb2sql compute_residue_pairs_ref DockQ ~~~~~~ .. autosummary:: :toctree: api/ compute_DockQScore CAPRI classes ~~~~~~~~~~~~~ .. autosummary:: :toctree: api/ compute_CapriClass Clashes ~~~~~~~ .. autosummary:: :toctree: api/ compute_clashes .. .. automodule:: pdb2sql.StructureSimilarity :members: :undoc-members: :show-inheritance: