pdb2sql.superpose.superpose¶
- pdb2sql.superpose.superpose(mobile, target, method='svd', only_backbone=True, export=True, **kwargs)[source]¶
superpose two complexes
- Parameters:
pdb (target {str or pdb2sql} -- name or sqldb of the target) –
pdb –
- Keyword Arguments:
(default (only_backbone {bool} -- use only backbone atos to align) – {‘svd’})
(default – True)
pdb (**kwargs -- keyword arguments used to select a portion of the) –
Example
>> pdb1 = ‘1AK4_5w.pdb’ >> pdb2 = ‘1AK4_10w.pdb’ >> superpose(pdb1, pdb2, chainID=’A’)